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- // Copyright Alain Miniussi 2014.
- // Distributed under the Boost Software License, Version 1.0.
- // (See accompanying file LICENSE_1_0.txt or copy at
- // http://www.boost.org/LICENSE_1_0.txt)
- // Authors: Alain Miniussi
- /** @file cartesian_communicator.hpp
- *
- * This header defines facilities to support MPI communicators with
- * cartesian topologies.
- * If known at compiled time, the dimension of the implied grid
- * can be statically enforced, through the templatized communicator
- * class. Otherwise, a non template, dynamic, base class is provided.
- *
- */
- #ifndef BOOST_MPI_CARTESIAN_COMMUNICATOR_HPP
- #define BOOST_MPI_CARTESIAN_COMMUNICATOR_HPP
- #include <boost/mpi/communicator.hpp>
- #include <vector>
- #include <utility>
- #include <iostream>
- #include <utility>
- #if !defined(BOOST_NO_CXX11_HDR_INITIALIZER_LIST)
- #include <initializer_list>
- #endif // BOOST_NO_CXX11_HDR_INITIALIZER_LIST
- // Headers required to implement cartesian topologies
- #include <boost/shared_array.hpp>
- #include <boost/assert.hpp>
- #include <boost/foreach.hpp>
- namespace boost { namespace mpi {
- /**
- * @brief Specify the size and periodicity of the grid in a single dimension.
- *
- * POD lightweight object.
- */
- struct cartesian_dimension {
- /** The size of the grid n this dimension. */
- int size;
- /** Is the grid periodic in this dimension. */
- bool periodic;
-
- cartesian_dimension(int sz = 0, bool p = false) : size(sz), periodic(p) {}
-
- private:
- friend class boost::serialization::access;
- template<class Archive>
- void serialize(Archive & ar, const unsigned int version)
- {
- ar & size & periodic;
- }
- };
- template <>
- struct is_mpi_datatype<cartesian_dimension> : mpl::true_ { };
- /**
- * @brief Test if the dimensions values are identical.
- */
- inline
- bool
- operator==(cartesian_dimension const& d1, cartesian_dimension const& d2) {
- return &d1 == &d2 || (d1.size == d2.size && d1.periodic == d2.periodic);
- }
- /**
- * @brief Test if the dimension values are different.
- */
- inline
- bool
- operator!=(cartesian_dimension const& d1, cartesian_dimension const& d2) {
- return !(d1 == d2);
- }
- /**
- * @brief Pretty printing of a cartesian dimension (size, periodic)
- */
- std::ostream& operator<<(std::ostream& out, cartesian_dimension const& d);
- /**
- * @brief Describe the topology of a cartesian grid.
- *
- * Behave mostly like a sequence of @c cartesian_dimension with the notable
- * exception that its size is fixed.
- * This is a lightweight object, so that any constructor that could be considered
- * missing could be replaced with a function (move constructor provided when supported).
- */
- class BOOST_MPI_DECL cartesian_topology
- : private std::vector<cartesian_dimension> {
- friend class cartesian_communicator;
- typedef std::vector<cartesian_dimension> super;
- public:
- /**
- * Retrieve a specific dimension.
- */
- using super::operator[];
- /**
- * @brief Topology dimentionality.
- */
- using super::size;
- using super::begin;
- using super::end;
- using super::swap;
- #if !defined(BOOST_NO_CXX11_DELETED_FUNCTIONS)
- cartesian_topology() = delete;
- #endif
- #if !defined(BOOST_NO_CXX11_DEFAULTED_FUNCTIONS)
- cartesian_topology(cartesian_topology const&) = default;
- cartesian_topology& operator=(cartesian_topology const&) = default;
- // There is apparently no macro for checking the support of move constructor.
- // Assume that defaulted function is close enough.
- #if !defined(BOOST_NO_CXX11_DEFAULTED_MOVES)
- cartesian_topology(cartesian_topology&& other) : super(other) {}
- cartesian_topology& operator=(cartesian_topology&& other) {
- stl().swap(other.stl());
- return *this;
- }
- #endif
- ~cartesian_topology() = default;
- #endif
- /**
- * @brief Create a N dimension space.
- * Each dimension is initialized as non periodic of size 0.
- */
- cartesian_topology(int ndim)
- : super(ndim) {}
-
- /**
- * @brief Use the provided dimensions specification as initial values.
- */
- cartesian_topology(std::vector<cartesian_dimension> const& dims)
- : super(dims) {}
- /**
- * @brief Use dimensions specification provided in the sequence container as initial values.
- * #param dims must be a sequence container.
- */
- template<class InitArr>
- explicit cartesian_topology(InitArr dims)
- : super(0) {
- BOOST_FOREACH(cartesian_dimension const& d, dims) {
- push_back(d);
- }
- }
- #if !defined(BOOST_NO_CXX11_HDR_INITIALIZER_LIST)
- /**
- * @brief Use dimensions specification provided in the initialization list as initial values.
- * #param dims can be of the form { dim_1, false}, .... {dim_n, true}
- */
- explicit cartesian_topology(std::initializer_list<cartesian_dimension> dims)
- : super(dims) {}
- #endif
- /**
- * @brief Use dimensions specification provided in the array.
- * #param dims can be of the form { dim_1, false}, .... {dim_n, true}
- */
- template<int NDIM>
- explicit cartesian_topology(cartesian_dimension (&dims)[NDIM])
- : super(dims, dims+NDIM) {}
- /**
- * @brief Use dimensions specification provided in the input ranges
- * The ranges do not need to be the same size. If the sizes are different,
- * the missing values will be complete with zeros of the dim and assumed non periodic.
- * @param dim_rg the dimensions, values must convert to integers.
- * @param period_rg the periodicities, values must convert to booleans.
- * #param dims can be of the form { dim_1, false}, .... {dim_n, true}
- */
- template<class DimRg, class PerRg>
- cartesian_topology(DimRg const& dim_rg, PerRg const& period_rg)
- : super(0) {
- BOOST_FOREACH(int d, dim_rg) {
- super::push_back(cartesian_dimension(d));
- }
- super::iterator it = begin();
- BOOST_FOREACH(bool p, period_rg) {
- if (it < end()) {
- it->periodic = p;
- } else {
- push_back(cartesian_dimension(0,p));
- }
- ++it;
- }
- }
-
- /**
- * @brief Iterator based initializer.
- * Will use the first n iterated values.
- * Both iterators can be single pass.
- * @param dit dimension iterator, value must convert to integer type.
- * @param pit periodicity iterator, value must convert to booleans..
- */
- template<class DimIter, class PerIter>
- cartesian_topology(DimIter dit, PerIter pit, int n)
- : super(n) {
- for(int i = 0; i < n; ++i) {
- (*this)[i] = cartesian_dimension(*dit++, *pit++);
- }
- }
-
- /**
- * Export as an stl sequence.
- */
- std::vector<cartesian_dimension>& stl() { return *this; }
- /**
- * Export as an stl sequence.
- */
- std::vector<cartesian_dimension> const& stl() const{ return *this; }
- /**
- * Split the topology in two sequences of sizes and periodicities.
- */
- void split(std::vector<int>& dims, std::vector<bool>& periodics) const;
- };
- inline
- bool
- operator==(cartesian_topology const& t1, cartesian_topology const& t2) {
- return t1.stl() == t2.stl();
- }
- inline
- bool
- operator!=(cartesian_topology const& t1, cartesian_topology const& t2) {
- return t1.stl() != t2.stl();
- }
- /**
- * @brief Pretty printing of a cartesian topology
- */
- std::ostream& operator<<(std::ostream& out, cartesian_topology const& t);
- /**
- * @brief An MPI communicator with a cartesian topology.
- *
- * A @c cartesian_communicator is a communicator whose topology is
- * expressed as a grid. Cartesian communicators have the same
- * functionality as (intra)communicators, but also allow one to query
- * the relationships among processes and the properties of the grid.
- */
- class BOOST_MPI_DECL cartesian_communicator : public communicator
- {
- friend class communicator;
- /**
- * INTERNAL ONLY
- *
- * Construct a cartesian communicator given a shared pointer to the
- * underlying MPI_Comm (which must have a cartesian topology).
- * This operation is used for "casting" from a communicator to
- * a cartesian communicator.
- */
- explicit cartesian_communicator(const shared_ptr<MPI_Comm>& comm_ptr)
- : communicator()
- {
- this->comm_ptr = comm_ptr;
- BOOST_ASSERT(has_cartesian_topology());
- }
- public:
- /**
- * Build a new Boost.MPI cartesian communicator based on the MPI
- * communicator @p comm with cartesian topology.
- *
- * @p comm may be any valid MPI communicator. If @p comm is
- * MPI_COMM_NULL, an empty communicator (that cannot be used for
- * communication) is created and the @p kind parameter is
- * ignored. Otherwise, the @p kind parameter determines how the
- * Boost.MPI communicator will be related to @p comm:
- *
- * - If @p kind is @c comm_duplicate, duplicate @c comm to create
- * a new communicator. This new communicator will be freed when
- * the Boost.MPI communicator (and all copies of it) is
- * destroyed. This option is only permitted if the underlying MPI
- * implementation supports MPI 2.0; duplication of
- * intercommunicators is not available in MPI 1.x.
- *
- * - If @p kind is @c comm_take_ownership, take ownership of @c
- * comm. It will be freed automatically when all of the Boost.MPI
- * communicators go out of scope.
- *
- * - If @p kind is @c comm_attach, this Boost.MPI communicator
- * will reference the existing MPI communicator @p comm but will
- * not free @p comm when the Boost.MPI communicator goes out of
- * scope. This option should only be used when the communicator is
- * managed by the user.
- */
- cartesian_communicator(const MPI_Comm& comm, comm_create_kind kind)
- : communicator(comm, kind)
- {
- BOOST_ASSERT(has_cartesian_topology());
- }
- /**
- * Create a new communicator whose topology is described by the
- * given cartesian. The indices of the vertices in the cartesian will be
- * assumed to be the ranks of the processes within the
- * communicator. There may be fewer vertices in the cartesian than
- * there are processes in the communicator; in this case, the
- * resulting communicator will be a NULL communicator.
- *
- * @param comm The communicator that the new, cartesian communicator
- * will be based on.
- *
- * @param dims the cartesian dimension of the new communicator. The size indicate
- * the number of dimension. Some dimensions be set to zero, in which case
- * the corresponding dimension value is left to the system.
- *
- * @param reorder Whether MPI is permitted to re-order the process
- * ranks within the returned communicator, to better optimize
- * communication. If false, the ranks of each process in the
- * returned process will match precisely the rank of that process
- * within the original communicator.
- */
- cartesian_communicator(const communicator& comm,
- const cartesian_topology& dims,
- bool reorder = false);
-
- /**
- * Create a new cartesian communicator whose topology is a subset of
- * an existing cartesian cimmunicator.
- * @param comm the original communicator.
- * @param keep and array containiing the dimension to keep from the existing
- * communicator.
- */
- cartesian_communicator(const cartesian_communicator& comm,
- const std::vector<int>& keep );
-
- using communicator::rank;
- /**
- * Retrive the number of dimension of the underlying toppology.
- */
- int ndims() const;
-
- /**
- * Return the rank of the process at the given coordinates.
- * @param coords the coordinates. the size must match the communicator's topology.
- */
- int rank(const std::vector<int>& coords) const;
- /**
- * Return the rank of the source and target destination process through a shift.
- * @param dim the dimension in which the shift takes place. 0 <= dim <= ndim().
- * @param disp the shift displacement, can be positive (upward) or negative (downward).
- */
- std::pair<int, int> shifted_ranks(int dim, int disp) const;
- /**
- * Provides the coordinates of the process with the given rank.
- * @param rk the ranks in this communicator.
- * @returns the coordinates.
- */
- std::vector<int> coordinates(int rk) const;
- /**
- * Retrieve the topology and coordinates of this process in the grid.
- *
- */
- void topology( cartesian_topology& dims, std::vector<int>& coords ) const;
- /**
- * Retrieve the topology of the grid.
- *
- */
- cartesian_topology topology() const;
- };
- /**
- * Given en number of processes, and a partially filled sequence
- * of dimension, try to complete the dimension sequence.
- * @param nb_proc the numer of mpi processes.fill a sequence of dimension.
- * @param dims a sequence of positive or null dimensions. Non zero dimension
- * will be left untouched.
- */
- std::vector<int>& cartesian_dimensions(int nb_proc, std::vector<int>& dims);
- } } // end namespace boost::mpi
- #endif // BOOST_MPI_CARTESIAN_COMMUNICATOR_HPP
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